Biology 410/510: Introduction to Bioinformatics and Genomics/Bioinformatics




If you need more information
contact Michael Bowman at
(503) 725-3690
or by e-mail at bowman@pdx.edu.

You can also contact the reference
desk at (503) 725-5874


CLASS LINKS

Research Tutorials

Finding Books

Finding Journal Articles


REFERENCE SOURCES

Finding Background Information


Research Tutorials

 

Get Started http://www.lib.pdx.edu/instruction/survivalguide/getstartedmain.html

Find Books http://www.lib.pdx.edu/instruction/survivalguide/booksmain.html

Find Articles http://www.lib.pdx.edu/instruction/survivalguide/articlesmain.html

Find Web Sites http://www.lib.pdx.edu/instruction/survivalguide/websitesmain.html

Boolean Operators (Laura Cohen, SUNY Albany) http://library.albany.edu/internet/boolean.html

Write & Cite http://www.lib.pdx.edu/instruction/survivalguide/writeandcitemain.htm


Finding Books

 

When searching for books on a topic, your best choices in the Library catalog (Vikat) are keyword searching and subject searching. Subject searching requires you to have some knowledge of the terms assigned to book topics by librarians. Some examples are listed below:

Bioinformatics
Biology data processing
Computational biology
Genomics
Immunoinformatics
Information storage and retrieval medicine
Medical informatics
Medical telematics
Medicine data processing
Microbial genomics
Neuroinformatics
Physiological genomics
Plant proteomics
Proteomics

Structural bioinformatics

Keyword searching is a more flexible way of combining search terms to retrieve books on your topic. When using keywords, be sure to think of synonyms (or related terms) for your search terms. You can also combine terms with the word and to make your results more relevant. For example:

plant and genomics

 

Remember, too, that you are not just limited to what we own in our Library. Whenever you are searching, you have the option of expanding your results by clicking on the Search Summit button in the upper right hand corner of the results screen. This automatically repeats your search in the Summit catalog of the Orbis Cascade Alliance. If you find an item in that catalog that you'd like to see, click on the REQUEST THIS ITEM link and follow the directions on the screen.

You can also browse the shelves to find books of interest. The primary call number areas to look at are:

Bioinformatic: QH324.2-QH324.25
Genomics: QH447-QH447.8
Medical informatics: R858-R859.7
 

If you cannot find what you need in the our catalog (Vikat) or the catalog of the Orbis Cascade Alliance (Summit), then you might try WorldCat.

WorldCat
Contains more than 30 millions records for materials cataloged by the Library of Congress and OCLC member libraries, including most academic and many public libraries in the U.S. Catalog includes books, serials (journals, magazines and newspapers), musical scores, recordings, videos, computer software, films, maps and manuscripts. Locations for all materials are cited. Can be searched by author, title, subject, year, language, material type.


Finding Journal Articles

 

To find articles in journals you will need to use one of the Library's print indexes or article databases. An index or article database will allow you to look for articles by title, by author, or by a few keywords that describe your topic. Most of the Library's electronic databases can be accessed from off-campus with your Odin/Webmail account.

ACM Guide to Computing Literature
(early 1960s-present)
One of the primary indexes to the computer science literature. This database indexes both journal articles and conference proceedings. Much of the material in this index is available full-text.

BIOSIS Previews (1990-present)
BIOSIS Previews is the primary index for the biological sciences. It comprehensively indexes the biological literature. Older years are available in print form in Biological Abstracts (Reference Z5321 .B56).

 

CiteSeer
A major full-text computer science database. Items are submitted by the authors themselves, so it is not comprehensive. Also includes citation indexing.

Health Source Plus: Nursing/Academic Edition
An index to academic and clinical medical journals. Not as comprehensive as Medline, but has a few hundred journals full-text.
 

MathSciNet (1949-present)
The primary index to mathematics and statistics.

Medline (1966-present)
The primary medical index. This is a very comprehensive database and the best source for medical informatics or for most materials dealing with human physiology.


Finding Background Information

 

Encyclopedic Dictionary of Genetics, Genomes, and Proteomics. George P. Rédei (2nd edition)
Reference QH427 .R43 2003

 
 

 

 

Page developed by Michael Bowman
Please send comments to bowman@pdx.edu

Last updated: 5 April 2005